Factory Command Start

I have a 2001 Tracker with manual transmission.
 
I am having a heck of a time setting the command start.  Anyone know the steps to do this?  I put the Tracker in neutral, put the e-brake on, press and hold the start button on the key pad, turn the key to off and pull it out.  The Tracker remains running with the key removed.  I then test it by pressing the start button on the key pad and the Tracker shuts off, which is what it should do. But then when I press the button again to restart it, it doesn't respond.  What am I doing wrong?
 
Any help will be greatly appreciated.
 
Thanks!